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chr17:42,628,193-43,570,226
Best TWAS P=1.47e-08 · Best GWAS P=1.3e-09 conditioned to 1
42.6M
42.8M
43M
43.2M
43.4M
43.6M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Stomach Adenocarcinoma
C17orf46
0.04
0.01
lasso
3
0.01
7.8e-02
5.7
5.7
1.5e-08
0.95
0.00
0.76
TRUE
2
The Cancer Genome Atlas
Colon Adenocarcinoma
C17orf46
0.07
0.00
enet
6
0.05
1.0e-03
6.1
5.3
1.1e-07
0.81
0.00
0.90
FALSE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
C17orf46
0.05
0.03
blup
36
0.03
4.8e-04
-3.7
5.3
1.1e-07
0.84
0.03
0.91
FALSE
1
GTEx
Testis
MAP3K14-AS1
0.26
0.18
lasso
4
0.17
4.6e-08
5.7
5.3
1.4e-07
0.95
0.01
0.99
FALSE
5
The Cancer Genome Atlas
Testicular Germ Cell Tumors
MGC57346
0.11
0.12
lasso
2
0.11
1.1e-04
5.7
-5.1
2.8e-07
-0.88
0.01
0.88
FALSE