Best TWAS P=2.7e-08 · Best GWAS P=6.59e-09 conditioned to 0.0273
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | TNNT3 | 0.33 | 0.16 | lasso | 7 | 0.17 | 2.0e-09 | -5.1 | -5.2 | 2.2e-07 | 0.91 | 0.01 | 0.99 | FALSE |
2 | YFS | Blood | TNNT3 | 0.02 | 0.02 | lasso | 3 | 0.01 | 1.9e-05 | -5.1 | 5.6 | 2.7e-08 | -0.81 | 0.01 | 0.99 | TRUE |