Best TWAS P=3.82e-10 · Best GWAS P=7.95e-10 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | LRP1 | 0.15 | 0.12 | lasso | 2 | 0.10 | 3.9e-08 | 6.1 | -6.3 | 3.8e-10 | -1 | 0.00 | 1.0 | TRUE |
2 | GTEx | Prostate | SUOX | 0.22 | 0.04 | enet | 11 | 0.05 | 2.3e-02 | 4.4 | -5.3 | 9.2e-08 | 0 | 0.02 | 0.8 | TRUE |