TWAS
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Genes
Traits
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chr1:5,988,926-7,460,433
Best TWAS P=1.81e-07 · Best GWAS P=4.4e-07 conditioned to 0.378
6M
6.2M
6.4M
6.6M
6.8M
7M
7.2M
7.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
DNAJC11
0.03
0.03
lasso
5
0.04
3.1e-05
-5.1
-5.2
1.8e-07
0.89
0.02
0.97
TRUE
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
DNAJC11
0.02
0.00
blup
74
0.01
9.1e-03
-4.7
-5.2
2.3e-07
0.90
0.02
0.64
FALSE
2
GTEx
Testis
THAP3
0.22
0.19
lasso
5
0.22
3.1e-10
-4.7
-5.2
2.4e-07
0.89
0.02
0.97
FALSE