Best TWAS P=1.16e-11 · Best GWAS P=1.43e-08 conditioned to 0.582
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Subcutaneous | ACTR1B | 0.29 | 0.15 | enet | 10 | 0.19 | 1.1e-15 | 5.6 | 6.5 | 5.9e-11 | 0.68 | 0.00 | 1.00 | FALSE |
2 | GTEx | Adipose Visceral Omentum | ACTR1B | 0.26 | 0.17 | lasso | 4 | 0.18 | 9.6e-10 | 5.6 | 6.7 | 2.5e-11 | 0.69 | 0.00 | 1.00 | FALSE |
3 | GTEx | Artery Aorta | ACTR1B | 0.16 | 0.18 | enet | 4 | 0.16 | 2.6e-09 | 5.6 | 6.2 | 6.0e-10 | 0.68 | 0.00 | 1.00 | FALSE |
4 | GTEx | Artery Tibial | ACTR1B | 0.31 | 0.25 | lasso | 5 | 0.34 | 4.8e-27 | 5.6 | 5.7 | 1.0e-08 | 0.63 | 0.00 | 1.00 | FALSE |
5 | GTEx | Brain Cerebellum | ACTR1B | 0.36 | 0.38 | lasso | 2 | 0.38 | 3.6e-12 | 5.6 | 5.6 | 2.6e-08 | 0.69 | 0.00 | 1.00 | FALSE |
6 | GTEx | Colon Transverse | ACTR1B | 0.17 | 0.14 | lasso | 3 | 0.15 | 1.9e-07 | 5.6 | 5.7 | 9.8e-09 | 0.69 | 0.00 | 1.00 | FALSE |
7 | GTEx | Esophagus Muscularis | ACTR1B | 0.27 | 0.18 | lasso | 3 | 0.25 | 2.9e-15 | 5.6 | 5.7 | 1.5e-08 | 0.64 | 0.00 | 1.00 | FALSE |
8 | GTEx | Lung | ACTR1B | 0.20 | 0.13 | lasso | 1 | 0.12 | 2.4e-09 | 5.6 | 5.6 | 2.4e-08 | 0.69 | 0.00 | 1.00 | FALSE |
9 | GTEx | Nerve Tibial | ACTR1B | 0.42 | 0.19 | enet | 11 | 0.23 | 2.3e-16 | 5.6 | 6.8 | 1.2e-11 | 0.78 | 0.00 | 1.00 | TRUE |
10 | GTEx | Pancreas | ACTR1B | 0.09 | 0.09 | enet | 26 | 0.08 | 2.0e-04 | 5.7 | 5.6 | 1.7e-08 | 0.73 | 0.00 | 0.96 | FALSE |
11 | GTEx | Pituitary | ACTR1B | 0.68 | 0.50 | lasso | 3 | 0.49 | 4.8e-14 | 5.6 | 5.5 | 3.2e-08 | 0.68 | 0.00 | 1.00 | FALSE |
12 | GTEx | Skin Sun Exposed Lower leg | ACTR1B | 0.13 | 0.11 | enet | 10 | 0.11 | 1.4e-09 | 5.6 | 5.7 | 1.6e-08 | 0.72 | 0.00 | 1.00 | FALSE |
13 | GTEx | Spleen | ACTR1B | 0.25 | 0.32 | lasso | 2 | 0.30 | 1.9e-08 | 5.6 | 6.0 | 2.3e-09 | 0.67 | 0.00 | 0.99 | FALSE |
14 | GTEx | Testis | ACTR1B | 0.23 | 0.21 | lasso | 1 | 0.20 | 4.1e-09 | 5.6 | 5.6 | 2.4e-08 | 0.69 | 0.00 | 1.00 | FALSE |
15 | GTEx | Thyroid | ACTR1B | 0.48 | 0.33 | lasso | 2 | 0.32 | 1.8e-25 | 5.6 | 5.6 | 2.8e-08 | 0.69 | 0.00 | 1.00 | FALSE |
16 | GTEx | Vagina | ACTR1B | 0.34 | 0.01 | enet | 7 | 0.00 | 3.9e-01 | 5.6 | 6.2 | 4.1e-10 | 0.62 | 0.01 | 0.74 | FALSE |
17 | GTEx | Whole Blood | ACTR1B | 0.09 | 0.04 | lasso | 3 | 0.04 | 1.7e-04 | 5.6 | 6.6 | 3.9e-11 | 0.83 | 0.00 | 1.00 | FALSE |
18 | METSIM | Adipose | ACTR1B | 0.18 | 0.14 | lasso | 7 | 0.16 | 2.0e-22 | 5.7 | 6.1 | 1.1e-09 | 0.92 | 0.00 | 1.00 | FALSE |
19 | METSIM | Adipose | ANKRD36 | 0.07 | 0.04 | lasso | 5 | 0.04 | 1.2e-06 | 5.6 | 6.4 | 1.2e-10 | 0.80 | 0.00 | 1.00 | FALSE |
20 | ROSMAP | Brain Pre-frontal Cortex | ACTR1B | 0.27 | 0.17 | bslmm | 137 | 0.19 | 1.8e-23 | 5.6 | 5.7 | 1.0e-08 | 0.70 | 0.00 | 1.00 | FALSE |