Best TWAS P=4.95e-11 · Best GWAS P=3.2e-16 conditioned to 3.66e-07
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | METSIM | Adipose | PHF15 | 0.03 | 0.01 | bslmm | 298 | 0.01 | 6.5e-03 | -8.1 | -6.6 | 4.9e-11 | 0.66 | 0.01 | 0.97 | TRUE |
2 | METSIM | Adipose | SAR1B | 0.06 | 0.02 | bslmm | 288 | 0.03 | 3.1e-05 | 2.5 | 6.2 | 5.8e-10 | -0.23 | 0.52 | 0.04 | FALSE |