Best TWAS P=9.18e-09 · Best GWAS P=2.47e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Mucosa | CPEB2 | 0.12 | 0.12 | lasso | 3 | 0.10 | 3.9e-07 | 5.6 | -5.7 | 9.2e-09 | -0.99 | 0.01 | 0.99 | TRUE |
2 | GTEx | Skin Sun Exposed Lower leg | RP11-665G4.1 | 0.09 | 0.11 | lasso | 1 | 0.09 | 5.0e-08 | 5.3 | -5.3 | 1.1e-07 | -0.93 | 0.08 | 0.92 | FALSE |