Best TWAS P=1.61e-09 · Best GWAS P=2.02e-10 conditioned to 0.00395
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | LFNG | 0.25 | 0.20 | lasso | 3 | 0.17 | 1.1e-08 | 5.9 | 6.0 | 1.6e-09 | 0.73 | 0 | 1.00 | TRUE |
| 2 | The Cancer Genome Atlas | Soft Tissue Sarcoma | LFNG | 0.13 | 0.02 | blup | 43 | 0.05 | 8.0e-04 | 6.4 | -5.7 | 1.3e-08 | -0.63 | 0 | 0.76 | FALSE |