Best TWAS P=5.41e-30 · Best GWAS P=1.07e-154 conditioned to 1.64e-115
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | PRKG2 | 0.14 | 0.03 | bslmm | 398 | 0.05 | 1.0e-06 | 20.5 | -11.4 | 5.4e-30 | -0.39 | 0.50 | 0.23 | TRUE |
| 2 | METSIM | Adipose | RASGEF1B | 0.04 | 0.00 | blup | 630 | 0.01 | 3.2e-03 | -3.4 | 7.5 | 8.9e-14 | 0.22 | 0.10 | 0.03 | TRUE |
| 3 | NTR | Blood | HNRNPD | 0.04 | 0.02 | lasso | 8 | 0.01 | 1.4e-05 | -7.3 | -7.3 | 2.1e-13 | -0.07 | 0.01 | 0.99 | TRUE |