Best TWAS P=1.48e-07 · Best GWAS P=4.15e-08 conditioned to 0.0157
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Muscularis | TRIM68 | 0.24 | 0.10 | lasso | 3 | 0.09 | 4.5e-06 | -5.2 | 5.2 | 1.9e-07 | -0.73 | 0.02 | 0.98 | FALSE |
2 | NTR | Blood | TRIM68 | 0.03 | 0.03 | bslmm | 693 | 0.02 | 2.0e-08 | -5.2 | 5.2 | 1.5e-07 | -0.73 | 0.02 | 0.98 | TRUE |