[Hub]/) : Traits : Height : ← →

chr12:5,879,851-6,956,462

Best TWAS P=3.9e-09 · Best GWAS P=2.34e-09 conditioned to 2.18e-06

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Artery Tibial RP4-761J14.8 0.11 0.02 lasso 2 0.00 1.7e-01 -5.7 -5.8 7.5e-09 -0.09 0.02 0.89 FALSE
2 GTEx Brain Cerebellum VAMP1 0.22 0.16 enet 27 0.20 1.5e-06 4.9 5.3 1.0e-07 0.02 0.04 0.94 FALSE
3 GTEx Skin Sun Exposed Lower leg ZNF384 0.07 0.00 enet 14 0.00 2.2e-01 3.5 -5.3 1.3e-07 -0.11 0.05 0.22 FALSE
4 METSIM Adipose ZNF384 0.08 0.02 bslmm 286 0.04 2.6e-07 -4.3 -5.9 3.9e-09 0.23 0.69 0.19 TRUE
5 The Cancer Genome Atlas Glioblastoma Multiforme VAMP1 0.13 0.07 blup 78 0.10 5.6e-04 4.9 5.2 2.4e-07 0.06 0.01 0.91 FALSE
6 The Cancer Genome Atlas Lung Squamous Cell Carcinoma VAMP1 0.09 0.12 lasso 3 0.10 5.5e-11 5.0 5.3 1.1e-07 0.00 0.06 0.93 FALSE
7 The Cancer Genome Atlas Prostate Adenocarcinoma VAMP1 0.21 0.30 lasso 6 0.32 1.6e-34 4.2 5.3 1.3e-07 0.02 0.08 0.91 FALSE
8 The Cancer Genome Atlas Stomach Adenocarcinoma VAMP1 0.14 0.13 blup 77 0.15 8.9e-11 4.1 5.1 2.9e-07 0.02 0.24 0.74 FALSE