Best TWAS P=6.04e-09 · Best GWAS P=2.95e-08 conditioned to 0.0398
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Esophagus Mucosa | LYG1 | 0.16 | 0.05 | enet | 20 | 0.08 | 5.9e-06 | -4.7 | -5.2 | 1.8e-07 | 0.05 | 0.06 | 0.89 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | AFF3 | 0.03 | 0.01 | blup | 240 | 0.02 | 6.6e-03 | 5.1 | 5.8 | 6.0e-09 | 0.78 | 0.02 | 0.91 | TRUE |