Best TWAS P=1.01e-07 · Best GWAS P=8.14e-08 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | KCNJ11 | 0.04 | 0.03 | lasso | 3 | 0.03 | 2.6e-04 | 5.3 | 5.3 | 1.0e-07 | 0.95 | 0.01 | 0.98 | TRUE |
| 2 | GTEx | Thyroid | RP1-239B22.5 | 0.08 | 0.07 | enet | 16 | 0.08 | 1.8e-06 | 5.2 | -5.3 | 1.3e-07 | -0.85 | 0.01 | 0.99 | FALSE |