Best TWAS P=1.49e-07 · Best GWAS P=4.92e-08 conditioned to 0.000276
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Liver | SMTNL1 | 0.24 | -0.01 | enet | 14 | 0.00 | 3.0e-01 | -1.9 | -5.2 | 1.5e-07 | 0.41 | 0.02 | 0.21 | TRUE |
| 2 | GTEx | Stomach | SMTNL1 | 0.13 | 0.11 | lasso | 3 | 0.13 | 6.9e-07 | -4.4 | -5.1 | 3.0e-07 | 0.56 | 0.02 | 0.91 | FALSE |