Best TWAS P=4.95e-09 · Best GWAS P=3.15e-10 conditioned to 1.37e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Cells Transformed fibroblasts | NID2 | 0.10 | 0.08 | lasso | 5 | 0.07 | 3.5e-06 | 5.3 | -5.8 | 7.6e-09 | -0.25 | 0.27 | 0.63 | TRUE |
| 2 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | C14orf166 | 0.26 | 0.10 | blup | 81 | 0.13 | 3.8e-06 | 5.6 | -5.8 | 4.9e-09 | -0.30 | 0.01 | 0.99 | TRUE |
| 3 | The Cancer Genome Atlas | Stomach Adenocarcinoma | C14orf166 | 0.16 | 0.09 | lasso | 6 | 0.10 | 6.2e-08 | 4.9 | -5.5 | 4.5e-08 | -0.45 | 0.01 | 0.99 | FALSE |