TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Waist Hip Ratio (WHR)
:
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chr8:88,801,153-89,582,625
Best TWAS P=1.99e-14 · Best GWAS P=1.13e-14 conditioned to 0.105
88.8M
88.9M
89M
89.1M
89.2M
89.3M
89.4M
89.5M
89.6M
0
5
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Thyroid Carcinoma
MMP16
0.10
0.09
lasso
4
0.08
2.9e-08
7.7
7.7
2.0e-14
0.93
0
1.00
TRUE
2
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
MMP16
0.10
0.08
blup
131
0.05
1.3e-03
7.7
5.7
1.5e-08
0.84
0
0.99
FALSE
1
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
MMP16
0.12
0.07
lasso
4
0.08
4.3e-09
7.7
5.6
2.4e-08
0.88
0
1.00
FALSE