Best TWAS P=5.23e-08 · Best GWAS P=8.51e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Visceral Omentum | PIGO | 0.10 | 0.07 | enet | 4 | 0.04 | 3.6e-03 | -5.3 | -5.4 | 5.2e-08 | -0.98 | 0.00 | 0.98 | TRUE |
2 | GTEx | Muscle Skeletal | FANCG | 0.09 | 0.03 | lasso | 5 | 0.05 | 2.1e-05 | -4.7 | 5.2 | 2.2e-07 | 0.84 | 0.02 | 0.97 | FALSE |