TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood White Count
:
←
→
chr10:44,616,548-45,123,379
Best TWAS P=1.45e-14 · Best GWAS P=4.82e-25 conditioned to 1.3e-15
44.6M
44.7M
44.8M
44.9M
45M
45.1M
0
5
10
15
20
25
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
CXCL12
0.03
0
blup
89
0.01
0.00042
2.7
7.7
1.5e-14
-0.38
0.05
0.12
TRUE