TWAS
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Traits
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Traits
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Blood White Count
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chr1:166,130,218-168,369,018
Best TWAS P=2.19e-12 · Best GWAS P=1.85e-12 conditioned to 1
166M
166.5M
167M
167.5M
168M
168.5M
0
2
4
6
8
10
12
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Adipose Subcutaneous
RCSD1
0.13
0.10
lasso
3
0.09
1.2e-07
7.0
7.0
2.2e-12
1.00
0.00
1.00
TRUE
2
GTEx
Brain Cerebellum
TADA1
0.23
0.11
enet
14
0.17
1.1e-05
5.6
5.5
4.7e-08
-0.07
0.17
0.67
TRUE
4
GTEx
Whole Blood
RCSD1
0.09
0.06
enet
28
0.04
2.4e-04
-4.2
5.9
3.0e-09
0.68
0.03
0.96
FALSE
3
GTEx
Lung
RCSD1
0.14
0.05
lasso
7
0.07
2.4e-06
3.6
5.8
8.1e-09
0.79
0.02
0.98
FALSE