Best TWAS P=1.04e-19 · Best GWAS P=7.07e-20 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NTR | Blood | CHSY1 | 0.03 | 0.03 | bslmm | 648 | 0.03 | 5.4e-10 | 9.1 | -9.1 | 1.0e-19 | -0.99 | 0 | 1 | TRUE |
2 | YFS | Blood | CHSY1 | 0.24 | 0.28 | enet | 27 | 0.28 | 7.9e-93 | 8.6 | -8.5 | 1.3e-17 | -0.98 | 0 | 1 | FALSE |