TWAS
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Usage
Models
Genes
Traits
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Traits
:
Blood White Count
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chr15:101,022,231-102,400,037
Best TWAS P=1.04e-19 · Best GWAS P=7.07e-20 conditioned to 1
101M
101.2M
101.4M
101.6M
101.8M
102M
102.2M
102.4M
0
5
10
15
20
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
NTR
Blood
CHSY1
0.03
0.03
bslmm
648
0.03
5.4e-10
9.1
-9.1
1.0e-19
-0.99
0
1
TRUE
2
YFS
Blood
CHSY1
0.24
0.28
enet
27
0.28
7.9e-93
8.6
-8.5
1.3e-17
-0.98
0
1
FALSE