TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood White Count
:
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chr18:66,371,289-68,204,223
Best TWAS P=3.64e-11 · Best GWAS P=9.29e-11 conditioned to 1
66.5M
67M
67.5M
68M
0
2
4
6
8
10
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
NTR
Blood
DOK6
0.18
0.18
lasso
5
0.18
3.2e-56
6.5
6.6
3.6e-11
0.98
0.00
1.00
TRUE
3
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
CD226
0.09
0.03
blup
76
0.06
1.7e-07
6.5
-6.6
4.1e-11
-0.84
0.00
1.00
FALSE
2
The Cancer Genome Atlas
Breast Invasive Carcinoma
CD226
0.04
0.04
enet
7
0.05
5.3e-10
6.5
-5.9
2.9e-09
-0.92
0.00
1.00
FALSE
4
The Cancer Genome Atlas
Brain Lower Grade Glioma
CD226
0.03
0.01
enet
7
0.02
4.3e-03
2.0
-5.3
1.2e-07
-0.53
0.02
0.61
FALSE