[Hub]/) : Traits : Blood White Count : ← →

chr2:181,042,370-183,096,746

Best TWAS P=2.14e-38 · Best GWAS P=9.9e-57 conditioned to 3.21e-29

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
5	NTR	Blood	ITGA4	0.03	0.01	bslmm	392	0.02	1.0e-06	-7.2	-13.0	2.1e-38	0.47	0.03	0.92	TRUE
7	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	ITGA4	0.08	0.00	blup	90	0.04	1.5e-04	-13.7	-10.6	3.1e-26	0.56	0.02	0.25	TRUE
4	METSIM	Adipose	ITGA4	0.04	0.00	bslmm	387	0.01	3.7e-02	-4.1	-9.7	3.9e-22	0.45	0.09	0.82	TRUE
2	GTEx	Esophagus Muscularis	UBE2E3	0.10	0.09	lasso	3	0.08	2.2e-05	8.0	9.4	3.3e-21	-0.05	0.81	0.01	TRUE
12	The Cancer Genome Atlas	Thyroid Carcinoma	ITGA4	0.04	0.03	blup	91	0.03	1.1e-03	4.3	8.6	5.4e-18	-0.31	0.22	0.17	TRUE
10	The Cancer Genome Atlas	Prostate Adenocarcinoma	ITGA4	0.04	0.03	lasso	4	0.04	7.5e-05	-5.4	-8.1	4.0e-16	0.43	0.31	0.26	TRUE
1	GTEx	Brain Hippocampus	FTH1P20	0.18	0.02	lasso	6	0.00	4.3e-01	8.4	-7.1	1.4e-12	0.00	0.08	0.06	TRUE
11	The Cancer Genome Atlas	Prostate Adenocarcinoma	UBE2E3	0.05	0.03	blup	61	0.03	4.0e-04	6.9	6.3	2.7e-10	0.04	0.48	0.04	TRUE
3	GTEx	Nerve Tibial	UBE2E3	0.09	0.03	lasso	3	0.03	6.4e-03	6.9	7.4	1.1e-13	0.01	0.42	0.12	FALSE
8	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	UBE2E3	0.04	0.02	blup	61	0.02	1.4e-03	6.9	6.8	1.5e-11	-0.01	0.11	0.06	FALSE
9	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	ITGA4	0.19	0.06	blup	90	0.09	1.8e-04	-7.2	-6.7	2.3e-11	0.56	0.07	0.45	FALSE
6	NTR	Blood	UBE2E3	0.02	0.00	bslmm	446	0.00	1.1e-02	8.0	6.4	1.8e-10	-0.03	0.24	0.02	FALSE