TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Blood White Count
:
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chr3:131,438,446-132,956,092
Best TWAS P=2.38e-09 · Best GWAS P=6.87e-10 conditioned to 0.0121
131.4M
131.6M
131.8M
132M
132.2M
132.4M
132.6M
132.8M
133M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Breast Mammary Tissue (Female)
DNAJC13
0.11
0.00
lasso
2
0.02
0.0911
6.0
-6.0
2.4e-09
-0.76
0.04
0.20
TRUE
3
The Cancer Genome Atlas
Soft Tissue Sarcoma
NPHP3
0.05
0.02
blup
43
0.03
0.0064
5.7
-5.8
6.5e-09
-0.46
0.01
0.76
FALSE
2
GTEx
Esophagus Mucosa
DNAJC13
0.11
0.01
enet
27
0.03
0.0037
4.8
-5.7
1.1e-08
-0.50
0.11
0.75
FALSE