TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood White Count
:
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chr4:6,213,622-7,733,843
Best TWAS P=4.04e-13 · Best GWAS P=2.85e-15 conditioned to 1.6e-05
6.2M
6.4M
6.6M
6.8M
7M
7.2M
7.4M
7.6M
7.8M
0
5
10
15
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
NTR
Blood
TBC1D14
0.05
0.03
lasso
7
0.02
7.5e-08
-7.4
7.2
4.0e-13
-0.62
0.04
0.96
TRUE
3
The Cancer Genome Atlas
Thyroid Carcinoma
TBC1D14
0.06
0.04
lasso
2
0.05
7.6e-06
-4.5
6.9
6.3e-12
-0.77
0.09
0.86
FALSE
2
YFS
Blood
TBC1D14
0.20
0.18
bslmm
650
0.19
2.6e-60
-7.4
6.7
2.1e-11
-0.47
0.04
0.96
FALSE