TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood Platelet Count
:
←
→
chr14:69,480,564-70,070,484
Best TWAS P=2.71e-20 · Best GWAS P=3.14e-35 conditioned to 4.81e-34
69.5M
69.6M
69.7M
69.8M
69.9M
70M
70.1M
0
10
20
30
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Brain Lower Grade Glioma
GALNTL1
0.06
0.01
blup
101
0.02
0.0018
9.4
9.2
2.7e-20
0.02
0.01
0.84
TRUE
2
The Cancer Genome Atlas
Stomach Adenocarcinoma
GALNTL1
0.09
0.00
blup
101
0.02
0.0198
-1.3
5.6
2.5e-08
-0.07
0.01
0.61
FALSE