Best TWAS P=5.69e-12 · Best GWAS P=7.29e-11 conditioned to 0.00262
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LMCD1 | 0.08 | 0.0 | blup | 137 | 0.04 | 2.9e-05 | -3.7 | -6.9 | 5.7e-12 | 0.59 | 0.01 | 0.95 | TRUE |
| 2 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | LMCD1 | 0.17 | 0.1 | enet | 4 | 0.13 | 2.0e-04 | -4.3 | 5.5 | 3.4e-08 | -0.36 | 0.09 | 0.30 | FALSE |