TWAS
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Traits
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Traits
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Blood Platelet Count
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chr3:46,323,859-47,717,626
Best TWAS P=3.54e-12 · Best GWAS P=1.52e-14 conditioned to 0.00103
46.4M
46.6M
46.8M
47M
47.2M
47.4M
47.6M
47.8M
0
5
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
NBEAL2
0.02
0.03
lasso
2
0.02
7.8e-04
-7.7
7.0
3.5e-12
-0.90
0.00
0.99
TRUE
3
GTEx
Nerve Tibial
NBEAL2
0.19
0.14
lasso
5
0.17
3.1e-12
-7.7
6.6
5.0e-11
-0.89
0.00
1.00
FALSE
2
GTEx
Artery Tibial
NBEAL2
0.07
0.03
enet
19
0.07
6.3e-06
-7.7
5.4
6.7e-08
-0.70
0.01
0.98
FALSE
4
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
NBEAL2
0.10
0.01
enet
22
0.04
3.3e-04
-7.7
5.3
9.0e-08
-0.63
0.00
0.85
FALSE