Best TWAS P=3.64e-11 · Best GWAS P=3.64e-24 conditioned to 2.14e-17
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | IFT57 | 0.18 | 0 | enet | 43 | 0.01 | 0.12500 | 8.22 | -5.5 | 3.2e-08 | 0.12 | 0.06 | 0.06 | FALSE |
2 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | LOC151658 | 0.06 | 0 | blup | 64 | 0.04 | 0.00059 | 0.28 | -6.6 | 3.6e-11 | 0.32 | 0.03 | 0.17 | TRUE |