TWAS
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Traits
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Traits
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Blood Platelet Count
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chr1:51,567,474-53,203,664
Best TWAS P=2.68e-09 · Best GWAS P=1.16e-08 conditioned to 1
51.6M
51.8M
52M
52.2M
52.4M
52.6M
52.8M
53M
53.2M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Whole Blood
NRD1
0.08
0.03
lasso
2
0.03
4.4e-04
-5.7
6.0
2.7e-09
-0.95
0.00
0.99
TRUE
5
GTEx
Whole Blood
RP4-657D16.3
0.07
0.02
lasso
3
0.03
3.5e-04
-5.7
5.9
4.4e-09
-0.91
0.01
0.99
FALSE
2
GTEx
Testis
NRD1
0.12
0.16
enet
8
0.12
5.6e-06
-5.5
5.6
2.3e-08
-0.89
0.02
0.98
FALSE
1
GTEx
Colon Transverse
RP11-91A18.4
0.10
0.07
lasso
3
0.03
1.1e-02
-5.5
-5.5
3.2e-08
0.88
0.02
0.81
FALSE
3
GTEx
Testis
RP4-657D16.3
0.13
0.10
enet
5
0.12
4.0e-06
-5.5
5.4
6.3e-08
-0.90
0.02
0.98
FALSE