Best TWAS P=2.04e-07 · Best GWAS P=1.28e-08 conditioned to 0.000914
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | TMPRSS13 | 0.09 | 0.02 | enet | 21 | 0.02 | 0.0444 | -5.4 | -5.2 | 2.0e-07 | 0.57 | 0.01 | 0.83 | TRUE |
| 2 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | TMPRSS13 | 0.18 | 0.04 | enet | 10 | 0.10 | 0.0015 | -1.7 | -5.1 | 2.7e-07 | 0.71 | 0.01 | 0.67 | FALSE |