Best TWAS P=8.1e-15 · Best GWAS P=1.31e-14 conditioned to 0.105
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | METSIM | Adipose | SLC38A2 | 0.02 | 0.02 | blup | 341 | 0.01 | 0.00581 | 6.9 | -5.6 | 2.5e-08 | -0.87 | 0.09 | 0.84 | FALSE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SLC38A2 | 0.10 | 0.06 | blup | 30 | 0.05 | 0.00083 | 7.6 | -7.8 | 8.1e-15 | -0.90 | 0.01 | 0.93 | TRUE |
| 3 | The Cancer Genome Atlas | Soft Tissue Sarcoma | SLC38A2 | 0.06 | 0.01 | blup | 30 | 0.03 | 0.00513 | 7.7 | -6.8 | 1.2e-11 | -0.93 | 0.01 | 0.79 | FALSE |