[Hub]/) : Traits : Hair Pigment : ← →

chr3:41,996,136-43,484,967

Best TWAS P=1.21e-09 · Best GWAS P=1.54e-09 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex HHATL 0.25 0.22 lasso 8 0.27 5.5e-33 -4.0 -5.4 8.2e-08 -0.72 0.96 0.04 FALSE
2 GTEx Adipose Subcutaneous CCDC13-AS1 0.27 0.11 lasso 4 0.24 2.8e-19 6.0 5.4 6.5e-08 0.84 0.01 0.99 FALSE
3 GTEx Artery Tibial ZBTB47 0.08 0.08 lasso 3 0.04 2.5e-04 6.0 -6.1 1.2e-09 -0.99 0.01 0.99 TRUE
4 GTEx Artery Tibial CCDC13-AS1 0.17 0.11 enet 20 0.12 4.9e-10 6.0 5.2 2.7e-07 0.88 0.01 0.99 FALSE
5 GTEx Lung CCDC13-AS1 0.09 0.00 enet 27 0.02 7.5e-03 6.0 5.7 1.0e-08 0.64 0.01 0.96 FALSE
6 ROSMAP Brain Pre-frontal Cortex HHATL 0.21 0.15 bslmm 465 0.18 1.3e-22 6.0 -6.1 1.3e-09 -0.84 0.01 0.99 FALSE
7 The Cancer Genome Atlas Colon Adenocarcinoma CCDC13 0.06 0.00 blup 59 0.01 1.4e-01 3.1 5.6 2.0e-08 0.83 0.01 0.67 FALSE
8 The Cancer Genome Atlas Glioblastoma Multiforme HHATL 0.18 0.12 enet 7 0.21 5.2e-07 3.6 -5.5 2.8e-08 -0.81 0.01 0.95 FALSE
9 The Cancer Genome Atlas Brain Lower Grade Glioma CCDC13 0.03 0.03 blup 59 0.03 3.8e-04 5.9 5.3 8.9e-08 0.94 0.01 0.98 FALSE
10 The Cancer Genome Atlas Brain Lower Grade Glioma HHATL 0.09 0.05 enet 10 0.10 7.4e-12 -4.6 -5.3 9.7e-08 -0.77 0.04 0.96 FALSE