Best TWAS P=9.93e-18 · Best GWAS P=4.96e-97 conditioned to 3.21e-73
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | CNTLN | 0.16 | 0.02 | enet | 21 | 0.06 | 1.3e-03 | -2.2 | -6.2 | 4.3e-10 | 0.19 | 0.32 | 0.05 | FALSE |
| 2 | GTEx | Muscle Skeletal | BNC2 | 0.13 | 0.03 | lasso | 6 | 0.02 | 2.1e-03 | -10.9 | -8.6 | 9.9e-18 | 0.38 | 0.32 | 0.08 | TRUE |
| 3 | METSIM | Adipose | CNTLN | 0.07 | 0.06 | bslmm | 789 | 0.06 | 1.1e-09 | -4.0 | -6.5 | 8.9e-11 | 0.20 | 1.00 | 0.00 | TRUE |