[Hub]/) : Traits : Tanning : ← →

chr5:176,040,488-177,260,129

Best TWAS P=7.93e-11 · Best GWAS P=4.15e-10 conditioned to 0.719

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Adipose Visceral Omentum	MXD3	0.33	0.06	lasso	6	0.05	9.1e-04	-5.9	-6.0	2.6e-09	0.89	0.00	0.99	FALSE
2	GTEx	Artery Aorta	MXD3	0.36	0.22	enet	45	0.29	2.4e-16	-5.9	-5.1	3.1e-07	0.71	0.00	1.00	FALSE
3	GTEx	Artery Tibial	MXD3	0.12	0.13	enet	5	0.12	7.0e-10	-5.9	-6.1	1.3e-09	0.92	0.00	1.00	FALSE
4	GTEx	Brain Cerebellum	MXD3	0.28	0.31	lasso	2	0.30	1.6e-09	-5.9	-5.9	3.1e-09	0.92	0.00	1.00	FALSE
5	GTEx	Brain Nucleus accumbens basal ganglia	MXD3	0.24	0.14	enet	10	0.25	2.9e-07	-5.9	-5.6	1.9e-08	0.83	0.00	0.98	FALSE
6	GTEx	Breast Mammary Tissue	MXD3	0.26	0.08	lasso	5	0.10	1.3e-05	-5.9	-5.5	3.1e-08	0.84	0.00	0.99	FALSE
7	GTEx	Breast Mammary Tissue (Female)	MXD3	0.23	0.08	lasso	3	0.09	1.1e-03	-6.0	-5.3	9.5e-08	0.76	0.01	0.85	FALSE
8	GTEx	Colon Sigmoid	MXD3	0.35	0.27	lasso	9	0.29	6.3e-11	-5.9	-5.8	5.7e-09	0.91	0.00	1.00	FALSE
9	GTEx	Colon Transverse	PRELID1	0.31	0.28	lasso	4	0.26	1.1e-12	-5.9	6.1	1.0e-09	-0.96	0.00	1.00	FALSE
10	GTEx	Esophagus Gastroesophageal Junction	MXD3	0.17	0.12	lasso	3	0.08	9.5e-04	-5.9	-5.8	8.7e-09	0.91	0.01	0.92	FALSE
11	GTEx	Esophagus Mucosa	MXD3	0.16	0.14	lasso	8	0.15	1.7e-10	-5.9	-5.8	7.6e-09	0.88	0.00	1.00	FALSE
12	GTEx	Esophagus Muscularis	MXD3	0.27	0.20	enet	10	0.24	1.6e-14	-5.9	-6.0	2.1e-09	0.93	0.00	1.00	FALSE
13	GTEx	Heart Atrial Appendage	MXD3	0.33	0.15	enet	24	0.16	1.5e-07	-5.9	-5.3	1.2e-07	0.76	0.00	1.00	FALSE
14	GTEx	Heart Left Ventricle	MXD3	0.17	0.03	lasso	3	0.03	1.5e-02	-5.9	-5.9	2.8e-09	0.92	0.00	0.97	FALSE
15	GTEx	Liver	PRELID1	0.22	0.25	lasso	3	0.24	2.4e-07	-6.0	6.1	1.3e-09	-0.95	0.00	0.99	FALSE
16	GTEx	Lung	MXD3	0.20	0.12	lasso	10	0.12	1.8e-09	-5.9	-5.6	2.7e-08	0.90	0.00	1.00	FALSE
17	GTEx	Nerve Tibial	MXD3	0.26	0.17	lasso	7	0.28	6.9e-20	-5.9	-5.6	2.1e-08	0.86	0.00	1.00	FALSE
18	GTEx	Skin Not Sun Exposed Suprapubic	MXD3	0.22	0.18	lasso	3	0.17	1.8e-09	-5.9	-6.1	1.0e-09	0.96	0.00	1.00	FALSE
19	GTEx	Skin Sun Exposed Lower leg	PRELID1	0.06	0.02	enet	5	0.03	3.4e-03	-5.9	5.7	1.6e-08	-0.92	0.01	0.99	FALSE
20	GTEx	Skin Sun Exposed Lower leg	MXD3	0.19	0.14	lasso	6	0.12	4.2e-10	-6.0	-5.9	4.3e-09	0.88	0.00	1.00	FALSE
21	GTEx	Small Intestine Terminal Ileum	PRELID1	0.47	0.16	enet	10	0.13	7.6e-04	-6.0	6.5	7.9e-11	-0.94	0.00	0.96	TRUE
22	GTEx	Thyroid	MXD3	0.31	0.17	lasso	8	0.24	1.1e-18	-5.9	-5.9	4.2e-09	0.90	0.00	1.00	FALSE
23	METSIM	Adipose	MXD3	0.18	0.18	lasso	3	0.21	1.3e-30	-5.9	-6.0	2.6e-09	0.88	0.01	0.99	FALSE
24	YFS	Blood	PRELID1	0.18	0.14	enet	18	0.18	4.0e-58	-5.8	5.3	1.3e-07	-0.78	0.02	0.98	FALSE
25	The Cancer Genome Atlas	Colon Adenocarcinoma	PRELID1	0.09	0.01	blup	38	0.05	1.1e-03	-6.2	5.6	2.5e-08	-0.80	0.00	0.93	FALSE
26	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	PRELID1	0.24	0.11	lasso	5	0.10	1.2e-11	-6.2	6.0	2.1e-09	-0.98	0.00	1.00	FALSE
27	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	PRELID1	0.33	0.08	enet	4	0.08	2.7e-05	-5.9	6.1	1.0e-09	-0.96	0.00	0.99	FALSE
28	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	PRELID1	0.08	0.10	lasso	4	0.07	2.9e-04	-5.8	5.9	2.9e-09	-0.88	0.01	0.96	FALSE
29	The Cancer Genome Atlas	Prostate Adenocarcinoma	MXD3	0.04	0.02	blup	40	0.03	2.8e-04	-5.9	-5.2	2.3e-07	0.88	0.02	0.96	FALSE