Best TWAS P=1.9e-09 · Best GWAS P=1.27e-14 conditioned to 7.04e-07
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | UBC | 0.11 | 0.06 | bslmm | 537 | 0.05 | 1.1e-06 | -5.9 | -6 | 1.9e-09 | 0.86 | 0.01 | 0.99 | TRUE |
2 | METSIM | Adipose | UBC | 0.17 | 0.10 | lasso | 7 | 0.11 | 1.9e-16 | -5.9 | -6 | 2.7e-09 | 0.86 | 0.03 | 0.97 | FALSE |