Best TWAS P=2.05e-08 · Best GWAS P=2.37e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | NKX2-2 | 0.02 | 0.03 | lasso | 4 | 0.02 | 0.001 | -5.2 | 5.6 | 2.1e-08 | -0.98 | 0 | 0.94 | TRUE |