[Hub]/) : Traits : Crohns Disease (2012) : ← →

chr19:48,957,497-49,452,462

Best TWAS P=4.1e-09 · Best GWAS P=4.26e-09 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma FUT2 0.10 0.02 blup 55 0.06 6.8e-04 5.9 -5.1 2.9e-07 -0.90 0.01 0.98 FALSE
2 The Cancer Genome Atlas Colon Adenocarcinoma FUT2 0.18 0.22 enet 12 0.18 6.8e-11 5.8 -5.6 1.8e-08 -0.95 0.01 0.99 FALSE
3 The Cancer Genome Atlas Lung Adenocarcinoma FUT2 0.09 0.12 blup 52 0.12 4.2e-14 5.9 -5.2 1.9e-07 -0.93 0.01 0.99 FALSE
4 The Cancer Genome Atlas Lung Squamous Cell Carcinoma FUT2 0.05 0.08 lasso 2 0.08 6.7e-09 5.6 -5.6 2.2e-08 -0.96 0.01 0.99 FALSE
5 The Cancer Genome Atlas Pancreatic Adenocarcinoma FUT2 0.08 0.12 lasso 4 0.11 2.5e-05 5.7 -5.7 1.2e-08 -0.92 0.01 0.97 FALSE
6 The Cancer Genome Atlas Prostate Adenocarcinoma FUT2 0.05 0.06 blup 52 0.06 8.6e-07 5.7 -5.3 1.4e-07 -0.94 0.01 0.99 FALSE
7 The Cancer Genome Atlas Rectum Adenocarcinoma FUT2 0.26 0.28 lasso 10 0.22 5.2e-06 5.8 -5.4 5.6e-08 -0.96 0.01 0.98 FALSE
8 The Cancer Genome Atlas Stomach Adenocarcinoma FUT2 0.14 0.16 lasso 8 0.14 4.9e-10 5.7 -5.9 4.1e-09 -0.96 0.01 0.99 TRUE