[Hub]/) : Traits : Crohns Disease (2012) : ← →

chr19:48,957,497-49,452,462

Best TWAS P=4.1e-09 · Best GWAS P=4.26e-09 conditioned to 1

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
8	The Cancer Genome Atlas	Stomach Adenocarcinoma	FUT2	0.14	0.16	lasso	8	0.14	4.9e-10	5.7	-5.9	4.1e-09	-0.96	0.01	0.99	TRUE
5	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	FUT2	0.08	0.12	lasso	4	0.11	2.5e-05	5.7	-5.7	1.2e-08	-0.92	0.01	0.97	FALSE
2	The Cancer Genome Atlas	Colon Adenocarcinoma	FUT2	0.18	0.22	enet	12	0.18	6.8e-11	5.8	-5.6	1.8e-08	-0.95	0.01	0.99	FALSE
4	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	FUT2	0.05	0.08	lasso	2	0.08	6.7e-09	5.6	-5.6	2.2e-08	-0.96	0.01	0.99	FALSE
7	The Cancer Genome Atlas	Rectum Adenocarcinoma	FUT2	0.26	0.28	lasso	10	0.22	5.2e-06	5.8	-5.4	5.6e-08	-0.96	0.01	0.98	FALSE
6	The Cancer Genome Atlas	Prostate Adenocarcinoma	FUT2	0.05	0.06	blup	52	0.06	8.6e-07	5.7	-5.3	1.4e-07	-0.94	0.01	0.99	FALSE
3	The Cancer Genome Atlas	Lung Adenocarcinoma	FUT2	0.09	0.12	blup	52	0.12	4.2e-14	5.9	-5.2	1.9e-07	-0.93	0.01	0.99	FALSE
1	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	FUT2	0.10	0.02	blup	55	0.06	6.8e-04	5.9	-5.1	2.9e-07	-0.90	0.01	0.98	FALSE