Best TWAS P=1.33e-07 · Best GWAS P=5.53e-07 conditioned to 0.298
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | RGS22 | 0.08 | 0.02 | enet | 14 | 0.04 | 6.3e-06 | 2.9 | 5.2 | 2.1e-07 | -0.63 | 0.24 | 0.57 | FALSE |
2 | GTEx | Testis | SPAG1 | 0.15 | 0.07 | enet | 6 | 0.10 | 5.2e-05 | 3.9 | -5.3 | 1.3e-07 | 0.84 | 0.03 | 0.96 | TRUE |