TWAS
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Usage
Models
Genes
Traits
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Traits
:
Lung FEV1/FVC ratio
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chr2:159,775,621-161,318,004
Best TWAS P=9.72e-10 · Best GWAS P=3.32e-08 conditioned to 0.332
159.8M
160M
160.2M
160.4M
160.6M
160.8M
161M
161.2M
161.4M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Thyroid
MARCH7
0.06
0.01
lasso
15
0.01
7.8e-02
4.7
6.1
9.7e-10
-0.81
0.04
0.91
TRUE
1
GTEx
Adipose Subcutaneous
AC009506.1
0.07
0.05
lasso
3
0.03
1.8e-03
-5.5
5.5
3.3e-08
-1.00
0.01
0.98
FALSE
3
GTEx
Artery Tibial
AC009506.1
0.11
0.11
lasso
4
0.10
5.5e-08
-5.4
5.3
9.0e-08
-0.92
0.02
0.98
FALSE
2
GTEx
Artery Aorta
AC009506.1
0.12
0.03
lasso
3
0.02
1.7e-02
-5.5
5.3
1.1e-07
-0.93
0.02
0.90
FALSE