Best TWAS P=4.61e-09 · Best GWAS P=5.24e-15 conditioned to 6.36e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | ITPR1-AS1 | 0.27 | 0.05 | lasso | 4 | 0.07 | 5.4e-04 | 4.82 | 5.9 | 4.6e-09 | 0.80 | 0.00 | 0.98 | TRUE |
| 2 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SUMF1 | 0.11 | 0.01 | blup | 450 | 0.04 | 2.1e-05 | 0.39 | -5.4 | 8.4e-08 | -0.24 | 0.17 | 0.12 | TRUE |