Best TWAS P=1.85e-07 · Best GWAS P=4.27e-07 conditioned to 0.118
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SEP15 | 0.04 | 0.06 | blup | 40 | 0.06 | 1.6e-07 | -4.8 | -5.2 | 2.0e-07 | 0.91 | 0.03 | 0.96 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | HS2ST1 | 0.04 | 0.00 | blup | 90 | 0.02 | 7.4e-03 | -4.4 | 5.2 | 1.9e-07 | -0.78 | 0.03 | 0.57 | TRUE |