Best TWAS P=4.04e-11 · Best GWAS P=9.8e-16 conditioned to 2.01e-10
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | SNX13 | 0.14 | 0.07 | lasso | 5 | 0.07 | 3.8e-04 | 7.1 | 6.6 | 4.0e-11 | -0.11 | 0.38 | 0.06 | TRUE |
| 2 | GTEx | Nerve Tibial | TWIST1 | 0.15 | 0.11 | lasso | 6 | 0.17 | 5.7e-12 | -5.0 | -5.8 | 7.8e-09 | 0.08 | 0.33 | 0.66 | TRUE |
| 3 | GTEx | Small Intestine Terminal Ileum | SNX13 | 0.29 | -0.01 | enet | 33 | 0.02 | 1.3e-01 | -3.8 | 5.9 | 4.7e-09 | -0.22 | 0.09 | 0.05 | TRUE |