Best TWAS P=6.39e-08 · Best GWAS P=4.43e-07 conditioned to 8.29e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Artery Aorta | MZT1 | 0.17 | 0.00 | enet | 7 | 0.00 | 2.9e-01 | 3.1 | 5.2 | 2.2e-07 | 0.04 | 0.02 | 0.08 | FALSE |
| 2 | YFS | Blood | PIBF1 | 0.03 | 0.02 | blup | 617 | 0.02 | 4.3e-07 | 4.1 | -5.1 | 2.7e-07 | -0.02 | 0.08 | 0.79 | FALSE |
| 3 | The Cancer Genome Atlas | Colon Adenocarcinoma | PIBF1 | 0.20 | 0.05 | blup | 96 | 0.10 | 2.4e-06 | -3.7 | -5.4 | 6.4e-08 | -0.02 | 0.02 | 0.57 | TRUE |
| 4 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PIBF1 | 0.11 | 0.05 | blup | 96 | 0.10 | 2.7e-11 | 4.1 | -5.4 | 8.2e-08 | -0.01 | 0.09 | 0.55 | FALSE |