Best TWAS P=6.17e-09 · Best GWAS P=5.57e-10 conditioned to 8.68e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | RAVER1 | 0.06 | 0.03 | bslmm | 388 | 0.04 | 2.5e-05 | -5.4 | -5.8 | 6.2e-09 | -0.55 | 0.03 | 0.90 | TRUE |
| 2 | GTEx | Stomach | KRI1 | 0.26 | 0.16 | enet | 21 | 0.14 | 3.8e-07 | -3.7 | 5.1 | 2.9e-07 | -0.05 | 0.02 | 0.55 | TRUE |
| 3 | The Cancer Genome Atlas | Breast Invasive Carcinoma | OLFM2 | 0.03 | 0.04 | blup | 47 | 0.04 | 6.7e-09 | 6.2 | -5.3 | 9.9e-08 | -0.85 | 0.00 | 1.00 | FALSE |