Best TWAS P=1.42e-08 · Best GWAS P=1.15e-11 conditioned to 1.3e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CHRNA9 | 0.04 | 0.01 | blup | 64 | 0.01 | 0.06 | 3.2 | -5.7 | 1.4e-08 | 0.31 | 0.02 | 0.38 | TRUE |