TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Hypothyroidism (self reported)
:
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chr4:40,097,557-40,605,238
Best TWAS P=1.42e-08 · Best GWAS P=1.15e-11 conditioned to 1.3e-07
40.1M
40.2M
40.3M
40.4M
40.5M
40.6M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
CHRNA9
0.04
0.01
blup
64
0.01
0.06
3.2
-5.7
1.4e-08
0.31
0.02
0.38
TRUE