[Hub]/) : Traits : Ovarian Cancer : ← →

chr3:155,768,424-157,456,920

Best TWAS P=4.37e-20 · Best GWAS P=1.12e-38 conditioned to 5.66e-16

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Cells Transformed fibroblasts	LINC00886	0.11	0.01	lasso	7	0.01	4.1e-02	1.9	7.7	1.2e-14	-0.69	0.08	0.48	TRUE
2	METSIM	Adipose	LEKR1	0.09	0.09	lasso	3	0.09	1.7e-13	-5.2	5.2	2.5e-07	-0.42	1.00	0.00	FALSE
3	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	LEKR1	0.10	0.14	lasso	6	0.12	1.8e-10	-5.2	5.3	1.4e-07	-0.42	1.00	0.00	FALSE
4	The Cancer Genome Atlas	Breast Invasive Carcinoma	LEKR1	0.13	0.16	lasso	5	0.15	3.6e-30	-5.3	5.4	6.8e-08	-0.42	1.00	0.00	FALSE
5	The Cancer Genome Atlas	Colon Adenocarcinoma	LEKR1	0.16	0.12	lasso	2	0.09	5.2e-06	-5.3	5.3	1.1e-07	-0.41	0.85	0.09	FALSE
6	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	LOC100287227	0.09	0.02	enet	8	0.02	1.3e-03	1.9	8.2	2.7e-16	-0.57	0.01	0.54	TRUE
7	The Cancer Genome Atlas	Lung Adenocarcinoma	LEKR1	0.09	0.12	lasso	1	0.11	1.2e-12	-5.3	5.3	1.0e-07	-0.42	1.00	0.00	FALSE
8	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	LEKR1	0.23	0.27	lasso	2	0.26	1.7e-17	-5.2	5.2	1.7e-07	-0.43	1.00	0.00	FALSE
9	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	LEKR1	0.14	0.15	lasso	1	0.15	9.8e-07	-5.3	5.3	1.0e-07	-0.42	0.40	0.40	FALSE
10	The Cancer Genome Atlas	Prostate Adenocarcinoma	LEKR1	0.20	0.19	lasso	5	0.19	2.6e-19	-5.3	5.1	3.0e-07	-0.41	1.00	0.00	FALSE
11	The Cancer Genome Atlas	Stomach Adenocarcinoma	LOC100287227	0.07	0.01	blup	47	0.02	9.8e-03	-9.5	9.2	4.4e-20	-0.71	0.02	0.25	TRUE
12	The Cancer Genome Atlas	Testicular Germ Cell Tumors	LEKR1	0.12	0.03	blup	114	0.03	2.5e-02	-3.5	5.7	1.1e-08	-0.44	0.02	0.54	FALSE
13	The Cancer Genome Atlas	Uterine Corpus Endometrial Carcinoma	LEKR1	0.21	0.14	lasso	4	0.10	8.6e-04	-5.3	5.3	1.0e-07	-0.42	0.08	0.20	FALSE