TWAS
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About
Usage
Models
Genes
Traits
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Traits
:
Blood Red Count
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chr9:127,512,040-129,422,783
Best TWAS P=1.85e-09 · Best GWAS P=2.06e-08 conditioned to 0.0202
127.5M
128M
128.5M
129M
129.5M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
YFS
Blood
PBX3
0.05
0.03
enet
18
0.03
5.6e-11
-4.3
6.0
1.9e-09
-0.63
0.66
0.32
TRUE
1
GTEx
Adipose Subcutaneous
PBX3
0.17
0.08
lasso
6
0.10
2.4e-08
-5.6
-5.2
1.6e-07
0.94
0.01
0.99
FALSE
2
GTEx
Cells Transformed fibroblasts
MAPKAP1
0.04
0.03
lasso
3
0.02
6.5e-03
4.9
5.2
1.7e-07
-0.54
0.12
0.78
FALSE
3
GTEx
Esophagus Muscularis
PBX3
0.12
0.08
lasso
7
0.09
4.2e-06
-4.6
-5.1
3.0e-07
0.87
0.03
0.97
FALSE