Best TWAS P=3.45e-08 · Best GWAS P=2.51e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Nerve Tibial | FBXO18 | 0.10 | 0.00 | lasso | 5 | 0.00 | 5.5e-01 | -4.8 | -5.2 | 2.4e-07 | -0.05 | 0.05 | 0.66 | TRUE |
2 | YFS | Blood | PRKCQ | 0.04 | 0.03 | lasso | 3 | 0.02 | 9.7e-09 | 6.0 | -5.5 | 3.4e-08 | -0.97 | 0.00 | 1.00 | TRUE |