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chr1:204,991,770-206,329,620

Best TWAS P=2.57e-08 · Best GWAS P=1.97e-07 conditioned to 0.397

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
6	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	PM20D1	0.29	0.35	enet	18	0.35	5.1e-41	5.1	-5.6	2.6e-08	0.86	0.00	1.00	TRUE
11	The Cancer Genome Atlas	Prostate Adenocarcinoma	PM20D1	0.16	0.14	enet	15	0.16	5.6e-16	5.1	-5.5	3.6e-08	0.90	0.00	1.00	FALSE
2	GTEx	Prostate	NUCKS1	0.38	0.23	lasso	8	0.32	7.5e-09	-5.1	5.4	7.2e-08	-0.95	0.01	0.97	FALSE
9	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	PM20D1	0.26	0.34	lasso	3	0.34	1.9e-40	5.1	-5.3	8.6e-08	0.88	0.00	1.00	FALSE
5	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	PM20D1	0.19	0.25	lasso	5	0.25	3.0e-28	5.1	-5.3	8.7e-08	0.86	0.00	1.00	FALSE
12	The Cancer Genome Atlas	Soft Tissue Sarcoma	PM20D1	0.23	0.24	lasso	4	0.24	1.2e-14	5.1	-5.3	1.1e-07	0.83	0.00	1.00	FALSE
3	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	PM20D1	0.22	0.26	lasso	5	0.26	1.7e-22	4.9	-5.3	1.5e-07	0.85	0.01	0.99	FALSE
4	The Cancer Genome Atlas	Breast Invasive Carcinoma	PM20D1	0.24	0.37	lasso	5	0.39	4.9e-85	5.1	-5.2	1.8e-07	0.83	0.00	1.00	FALSE
7	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	PM20D1	0.19	0.19	enet	4	0.19	4.5e-11	5.1	-5.2	1.8e-07	0.81	0.00	0.99	FALSE
13	The Cancer Genome Atlas	Skin Cutaneous Melanoma	PM20D1	0.17	0.11	lasso	3	0.07	5.0e-03	5.1	-5.2	1.9e-07	0.78	0.00	0.80	FALSE
15	The Cancer Genome Atlas	Thyroid Carcinoma	PM20D1	0.26	0.40	lasso	4	0.41	2.0e-42	5.1	-5.2	1.9e-07	0.82	0.00	1.00	FALSE
8	The Cancer Genome Atlas	Lung Adenocarcinoma	PM20D1	0.31	0.39	enet	16	0.41	5.1e-52	5.1	-5.2	2.2e-07	0.82	0.00	0.99	FALSE
10	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	PM20D1	0.12	0.13	blup	47	0.12	9.1e-09	5.1	-5.2	2.2e-07	0.76	0.00	1.00	FALSE
14	The Cancer Genome Atlas	Stomach Adenocarcinoma	PM20D1	0.09	0.11	enet	6	0.10	1.3e-07	-5.2	-5.2	2.2e-07	0.96	0.00	1.00	FALSE
1	GTEx	Pancreas	SLC41A1	0.24	0.21	lasso	5	0.19	1.4e-08	5.1	5.2	2.4e-07	-0.77	0.00	1.00	FALSE