Best TWAS P=1.95e-08 · Best GWAS P=4.09e-09 conditioned to 2.34e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | OAF | 0.23 | 0.09 | enet | 17 | 0.14 | 3.1e-17 | -5.1 | 5.6 | 1.9e-08 | -0.13 | 0.12 | 0.88 | TRUE |
| 2 | GTEx | Cells Transformed fibroblasts | OAF | 0.19 | 0.14 | lasso | 3 | 0.13 | 1.1e-09 | -5.1 | 5.1 | 2.9e-07 | -0.04 | 0.07 | 0.92 | FALSE |
| 3 | GTEx | Esophagus Muscularis | OAF | 0.26 | 0.14 | lasso | 7 | 0.12 | 5.9e-08 | -5.1 | 5.3 | 9.1e-08 | -0.10 | 0.10 | 0.89 | FALSE |